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CPersona — Persistent AI memory server with 3-layer hybrid search, confidence scoring, and 29 tools. MIT licensed.
Give Claude persistent memory across sessions. Single SQLite file. 29 tools. Zero LLM dependency.
Quick Start · Features · Architecture · All Tools · Zenn Book (JP)
Standalone repository — This is the standalone version for use with Claude Desktop, Claude Code, and any MCP client. If you are a ClotoCore user, install CPersona from the in-app marketplace (ClotoHub) instead — it distributes this same repository.
Project status (July 2026) — The 2.4 series is the Stable line (latest: v2.4.40, gated by three comprehensive audit rounds — see Quality Assurance). The 2.5 series is the Current line (latest: v2.5.1) — an internal stabilization line that has passed the full release gate and is where all fixes land, pending production-soak certification; the DB schema is preserved across the line, and feature development resumes in 2.6. The 2.5.2 pre-releases change three things about MCP tool responses —
storereports its outcome inresult(stored / skipped / rejected) instead of an always-trueok,check_healthreports the singlestatusverdict without thehealthyboolean, and every tool-level failure now carriesok: false(most used to returnerroralone, with nookto branch on; the explanation still travels inerror, except onstore, which puts it inreason). Tiers and support windows: Release Channels & Support.
Claude forgets everything between sessions. Every conversation starts from zero — no context about your project, your preferences, or what you discussed yesterday.
cpersona fixes this. It's an MCP server that stores memories in a local SQLite file and retrieves them through hybrid search. Claude remembers you.
Prerequisites: Python 3.11+ (and uv for the one-command path).
Claude Code? Let the agent do the setup. This repo ships an Agent Skill that walks Claude through the whole installation — cpersona, the embedding server, MCP registration, and a store/recall smoke test — and, more importantly, teaches it when to store, recall, and archive memories afterwards:
hljs language-bash# Installed from PyPI? The skill ships inside the wheel — no clone needed: python -c "import cpersona,pathlib,shutil; s=pathlib.Path(cpersona.__file__).parent/'skills'/'cpersona-memory'; shutil.copytree(s, pathlib.Path.home()/'.claude/skills/cpersona-memory', dirs_exist_ok=True)" # Running via uvx (isolated environment), or not installed yet: git clone --depth 1 https://github.com/Cloto-dev/cpersona.git /tmp/cpersona mkdir -p ~/.claude/skills && cp -r /tmp/cpersona/skills/cpersona-memory ~/.claude/skills/Then just tell Claude Code: "Set up CPersona — I want persistent memory." The manual steps below are for Claude Desktop users and anyone who prefers to configure things by hand.
uvx cpersona # run directly, no install step
# or
pip install cpersona # then the `cpersona` command is on your PATH
git clone https://github.com/Cloto-dev/cpersona.git
cd cpersona
python -m venv .venv
source .venv/bin/activate # Windows: .venv\Scripts\activate
pip install .
Run it with python -m cpersona (or python server.py).
cpersona's hybrid search works best with an embedding server for vector similarity. cpersona is embedding-server-agnostic: point CPERSONA_EMBEDDING_URL (see step 3) at any HTTP endpoint that implements the following minimal contract.
POST /embed
Request: { "texts": ["string", ...] } # non-empty array, max 100 per batch
Response: { "embeddings": [[float, ...], ...], "dimensions": <int> }
Contract requirements (2.5.0b1 clarifications):
api mode and all
CEmbedding providers) already normalizes.check_health(fix=true) repairs NULLed rows) and
calibrate_threshold.The reference server is CEmbedding (MIT) — it runs jina-v5-nano on-device (CPU) and exposes exactly this endpoint:
git clone https://github.com/Cloto-dev/CEmbedding.git && cd CEmbedding
python -m venv .venv && source .venv/bin/activate # Windows: .venv\Scripts\activate
pip install ".[onnx]"
python download_model.py --model jina-v5-nano
EMBEDDING_PROVIDER=onnx_jina_v5_nano python server.py # serves http://127.0.0.1:8401/embed
cpersona ships with defaults tuned against jina-v5-nano (768d). Any other server that satisfies the contract above works too — see Benchmarks for models with published measurements.
Without an embedding server, cpersona falls back to FTS5 + keyword search only. Vector search (the strongest retrieval layer) will be disabled.
Claude Desktop — add to claude_desktop_config.json:
{
"mcpServers": {
"cpersona": {
"command": "uvx",
"args": ["cpersona"],
"env": {
"CPERSONA_DB_PATH": "/home/you/.claude/cpersona.db",
"EMBEDDING_MODE": "http",
"EMBEDDING_HTTP_URL": "http://127.0.0.1:8401/embed"
}
}
}
}
The embedding server from step 2 is a plain HTTP process, not an MCP server — run it however you run background services (a terminal, launchd/systemd, etc.); cpersona only needs its URL.
Windows: use
C:/Users/you/.claude/cpersona.dbfor the DB path. No embedding server yet? Drop the twoEMBEDDING_*lines (or setEMBEDDING_MODE=none) — cpersona runs on FTS5 + keyword and tells you when it's degraded.
Claude Code:
claude mcp add-json cpersona '{"type":"stdio","command":"uvx","args":["cpersona"],"env":{"CPERSONA_DB_PATH":"/home/you/.claude/cpersona.db","EMBEDDING_MODE":"http","EMBEDDING_HTTP_URL":"http://127.0.0.1:8401/embed"}}' -s user
That's it. Claude now has persistent memory. Ask it to store something and recall it in a later session.
Hybrid Search — Three independent retrieval strategies run in parallel and merge results via Reciprocal Rank Fusion (RRF):
| Layer | Method | Strength |
|---|---|---|
| Vector | Cosine similarity (jina-v5-nano, 768d) | Semantic meaning |
| FTS5 | SQLite full-text search with trigram tokenizer | Exact terms, names, IDs |
| Keyword | Fallback pattern matching | Edge cases, partial matches |
Memory Types:
storearchive_episodeupdate_profileConfidence Scoring — Each recalled memory gets a confidence score combining:
Zero LLM Dependency — cpersona is a pure data server. It never calls an LLM internally. All summarization and extraction is performed by the calling agent. This means zero API costs from cpersona itself, deterministic behavior, and no hidden latency.
Additional capabilities:
critical/warn/info) and auto-repair (contamination, duplicates, FTS integrity, embedding dimension drift, schema objects, isolation-axis hygiene, stale tasks, invalid data), plus a python -m cpersona.checkup CLI for CI gating ┌─────────────────────────────────────┐
│ MCP Host │
│ (Claude Desktop / Claude Code) │
└──────────────┬──────────────────────┘
│ MCP (JSON-RPC)
┌──────────────▼──────────────────────┐
│ cpersona │
│ (server.py) │
│ │
│ ┌─────────┐ ┌─────────┐ │
│ │ store │ │ recall │ ... │
│ └────┬────┘ └────┬────┘ │
│ │ │ │
│ ┌────▼─────────────▼────────────┐ │
│ │ SQLite DB │ │
│ │ │ │
│ │ memories (content + embed) │ │
│ │ episodes (summaries) │ │
│ │ profiles (attributes) │ │
│ │ memories_fts (FTS5 index) │ │
│ │ episodes_fts (FTS5 index) │ │
│ │ pending_memory_tasks (queue) │ │
│ └────────────────────────────────┘ │
│ │
└──────────────┬───────────────────────┘
│ HTTP
┌──────────────▼──────────────────────┐
│ Embedding Server │
│ (jina-v5-nano ONNX, 768d) │
└─────────────────────────────────────┘
Recall flow (RRF mode):
Query → ┌── Vector search (cosine similarity) ──┐
├── FTS5 search (episodes + memories) ──┼── RRF merge → Confidence scoring → Top-K
└── Keyword fallback ──┘
Measured on LMEB (Long-horizon Memory Embedding Benchmark, arXiv:2603.12572) — 22 datasets subsuming LoCoMo and LongMemEval, measured here as 22 retrieval tasks. The metric is Mean NDCG@10 across all 22 tasks.
Two tracks isolate the pipeline's contribution:
store/recall code paths: SQLite + FTS5 + RRF fusion + per-agent auto-calibration (cpersona v2.4.40, full-ranking regime).| Embedding Model | Params | Dim | Track A (raw) | Track B (cpersona) | Δ |
|---|---|---|---|---|---|
| all-MiniLM-L6-v2 | 22M | 384 | 43.67 | 50.10 | +6.43 |
| bge-m3 | 568M | 1024 | 56.83 | 57.66 | +0.83 |
cpersona's hybrid pipeline outranks the raw embedding on both models (Track B > Track A) — the fusion layers add signal rather than merely persisting vectors. The weaker the embedding, the larger the pipeline's contribution: the FTS5/keyword layers rescue queries the vector search alone misses. Methodology, the measurement harness, and the reproduction regime live in benchmarks/.
| Tool | Description |
|---|---|
store | Store a message in agent memory |
recall | Recall relevant memories (vector + FTS5 + keyword, RRF merge) |
recall_with_context | Recall with external conversation context (auto-dedup) |
get_contents | Expand recall preview refs (mem:<id> / ep:<id>) to full content |
get_profile | Get current agent profile |
update_profile | Save pre-computed agent profile |
get_operating_context | Read the operator-owned operating context served to every client (read-only; edited on the filesystem) |
archive_episode | Archive conversation episode with summary and keywords |
list_memories | List recent memories |
list_episodes | List archived episodes |
update_memory | Update memory content (rejects if locked) |
lock_memory | Lock memory to prevent deletion/editing |
unlock_memory | Unlock memory to allow deletion/editing |
delete_memory | Delete a single memory (ownership enforced) |
delete_episode | Delete a single episode (ownership enforced) |
delete_agent_data | Delete all data for an agent |
calibrate_threshold | Auto-calibrate vector search threshold via z-score |
set_recall_precision | Set an agent's recall precision (knob 3) and recalibrate its gate |
get_recall_precision | Read an agent's effective recall precision (knob 3) |
pause_persistence | Turn writes into no-ops for an opt-in TTL window |
resume_persistence | Re-enable persistence immediately |
persistence_status | Report whether persistence is paused and the TTL remaining |
migrate_channel_axis | Re-channel bridge-type memories to their concrete channel |
export_memories | Export to JSONL (memories, episodes, profiles) |
import_memories | Import from JSONL (idempotent via msg_id dedup) |
merge_memories | Merge one agent's data into another (atomic, with dedup) |
get_queue_status | Background task queue status |
check_health | Registry-driven health check (severity-tagged issues) with auto-repair |
deep_check | Deep semantic data quality analysis with auto-repair |
All settings via environment variables with sensible defaults:
| Variable | Default | Description |
|---|---|---|
CPERSONA_DB_PATH | ./cpersona.db | SQLite database path |
CPERSONA_EMBEDDING_MODE | none | Embedding mode (http or none) |
CPERSONA_EMBEDDING_URL | (unset) | Embedding server URL, e.g. http://127.0.0.1:8401/embed |
CPERSONA_VECTOR_SEARCH_MODE | local | Vector search execution (local in-process cosine, or remote offload) |
CPERSONA_RECALL_MODE | rrf | Recall fusion strategy (rrf, rsf, or cascade) |
CPERSONA_RECALL_PREVIEW_CHARS | 500 | Preview tier: max content chars returned by the recall tools (0 disables; full_content=true / get_contents fetch full text) |
CPERSONA_RRF_K | 60 | RRF smoothing parameter |
CPERSONA_CONFIDENCE_ENABLED | false | Include confidence metadata in results |
CPERSONA_AUTO_CALIBRATE | false | Auto-calibrate on startup |
CPERSONA_TASK_QUEUE_ENABLED | true | Background task queue (DB-persisted, crash-recoverable) |
CPERSONA_RECENT_RECALL_PENALTY | 0.7 | Penalty for recently recalled memories |
CPERSONA_RECENT_RECALL_WINDOW_MIN | 5 | Window (minutes) for recent recall penalty |
The generic aliases EMBEDDING_MODE / EMBEDDING_HTTP_URL / EMBEDDING_MODEL
are also accepted (the CPERSONA_-prefixed form wins when both are set) — the
marketplace catalog and the Quick Start use the generic names.
CPERSONA_RECALL_MODE)rrf (default) — Reciprocal Rank Fusion: merges the vector + FTS channels by
rank only. Robust and scale-free, but discards score magnitude.rsf — Relative Score Fusion: per-query min-max-normalizes each channel's raw
score (cosine for vector, bm25 for keyword) and sums them, so the keyword channel's
bm25 magnitude survives the merge. Recommended for topic-drift-prone or space-less
language (e.g. Japanese) contexts, where that magnitude is the discriminating
signal rrf flattens away (≈ Weaviate's relativeScoreFusion; see the ClotoCore
RECALL_CONTAMINATION_AB_2026-06-14 report §10–12). Caveat: min-max normalization
can over-cut small, closely-scored result sets when autocut is enabled — rrf
remains the default until that interaction is hardened.cascade — Sequential channel fill (legacy).cpersona is an MCP server — it works with any MCP-compatible host:
cpersona is the memory layer of ClotoCore, an open-source AI agent platform written in Rust. While cpersona is fully standalone (MIT license), it was designed to give AI agents persistent, searchable memory within the ClotoCore ecosystem.
Every release is gated by a machine-verifiable quality process:
qa/issue-registry.json with a machine-checkable
code pattern; scripts/verify-issues.sh verifies
that every fix marker is still present (and every removed defect stays
removed), so a regression or a silently-reverted fix fails loudly.check_health performs no embedding network I/O
while holding the write lock.docs/RELEASE_LIFECYCLE_STANDARD.md
(v1.0), piloted in this repository as the reference implementation for
Cloto-family projects.Releases follow a three-tier model — Stable (production-certified, critical fixes only), Current (newest release line, all fixes land here), and Experimental (alpha/beta pre-releases, opt-in). When a new line is certified Stable, the previous one keeps critical-fix support for 30 more days, then reaches EOL. Current status: 2.4.x is the Stable line (latest v2.4.40) and 2.5.x is the Current line (latest v2.5.1), where all fixes land while it awaits production-soak certification.
Known issue: v2.4.39 and earlier under-scan vector recall on corpora beyond a few hundred rows (bug-085; v2.4.38–v2.4.39 are the most affected — the limit clamp closed the only workaround). Fixed in v2.4.40; upgrading is strongly recommended. See SUPPORT.md § Known issues.
Full policy: SUPPORT.md · specification: RELEASE_LIFECYCLE_STANDARD.md · security reports: SECURITY.md.
Open an issue — bug report or feature request.
Reports are welcome even when you are not certain it is a bug. If it turns out to be a configuration problem, that is still useful signal — it means the documentation was unclear, which is a defect of its own. Security vulnerabilities are the one exception: please report those privately via SECURITY.md rather than in a public issue.
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